SU 5 *original sequence: UDELPATPK0008E6 udel.pat.pk0008.e6 Length = 494 Frame = -3 >Mature sequence: VHNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFIS SLSASADVLIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDP QHDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNL EVPTYQFVGDDLVVVG ------------------------------------------------------------------------------ Genebank: >gi|12834944 Frame = +3 ggaccgacga ggtggtttga gcagctgtcg ccatgttgtc ggtcgccgcc cgctcgggcc cgttcgcgcc cgtcctatcg gccacttccc gcggggtggc gggcgcgctg cgtcctctgc tgcaaggcgc ggtgcccgcc gcctcggagc cacctgttct ggatgtgaag cgacccttcc tgtgccgcga gtccctgagt ggccaggccg cagcccggcc tttggtggcc acggtgggcc tgaacgttcc tgcttctgtc cgtttttccc atacagatgt caaggtgccc gacttctctg actatcgtcg tgctgaagtt cttgatagca caaaatcttc taaagaaagc agtgaggcta gaaaaggctt ctcttacctg gtaactgcaa ctactactgt gggtgttgct tatgcggcca aaaatgtggt ctcccagttt gtttccagca tgagtgcttc tgctgacgta ctggccatgt cgaagatcga gatcaagttg tctgatatcc ctgaagggaa gaacatggct tttaaatgga gaggcaaacc tctgtttgtg cgccatagaa ccaagaagga gattgaccag gaagctgcag tcgaagtgtc ccagttaagg gacccacagc atgatttaga tcgagtaaag aaacctgaat gggttattct gataggtgtc tgtactcatc ttggttgtgt acccattgca aacgcaggag attttggtgg ctattattgc ccctgccatg ggtcacacta tgacgcctct ggcaggatca ggaagggccc tgcacctctc aacctggaag tgcctgccta cgagttcacc agtgatgatg tagttgttgt gggttagaca cgtggactca gggcctaggt ttctgtcggt cttcaggtcc cctcagaaga gtggagagta agccttgtgt acgtctaggt tggttgattt aaaatattta agaattgtta ataatgtatt ggcaaacatt aatgtgaagt aattgaattc actgttaaat attatcaagc attagcataa taaaaccact gttgaacatc >gi|13385167 Frame = +1 gctctcttcg ggccgtcgtt cgaacgaaag gtcgtccctg tgaccgacga ggtggtttga gcagctgtcg ccatgttgtc ggtcgccgcc cgctcgggcc cgttcgcgcc cgtcctatcg gccacttccc gcggggtggc gggcgcgctg cgtcctctgc tgcaaggcgc ggtgcccgcc gcctcggagc cacctgttct ggatgtgaag cgacccttcc tgtgccgcga gtccctgagt ggccaggccg cagcccggcc tttggtggcc acggtgggcc tgaacgttcc tgcttctgtc cgtttttccc atacagatgt caaggtgccc gacttctctg actatcgtcg tgctgaagtt cttgatagca caaaatcttc taaagaaagc agtgaggcta gaaaaggctt ctcttacctg gtaactgcaa ctactactgt gggtgttgct tatgcggcca aaaatgtggt ctcccagttt gtttccagca tgagtgcttc tgctgacgta ctggccatgt cgaagatcga gatcaagttg tctgatatcc ctgaagggaa gaacatggct tttaaatgga gaggcaaacc tctgtttgtg cgccatagaa ccaagaagga gattgaccag gaagctgcag tcgaagtgtc ccagttaagg gacccacagc atgatttaga tcgagtaaag aaacctgaat gggttattct gataggtgtc tgtactcatc ttggttgtgt acccattgca aacgcaggag attttggtgg ctattattgc ccctgccatg ggtcacacta tgacgcctct ggcaggatca ggaagggccc tgcacctctc aacctggaag tgcctgccta cgagttcacc agtgatgatg tagttgttgt gggttagaca cgtggactca gggcctaggt ttctgtcggt cttcaggtcc cctcagaaga gtggagagta agccttgtgt acgtctaggt tggttgattt aaaatattta agaattgtta ataatgtatt ggcaaacatt aatgtgaagt aattgaattc actgttaaat attatcaagc attagcataa taaaaccact gttgaacatc attagattca gtcatagact tgaaaggtgc aatgtctttg atagctaatt ctaataaaac attacagatt gttgtattgg tgttctcatc taaatttctt ttcgtatctt gaacttgaga aaaggtgggg acattatttt tcatctcaaa gtggatggga aaatcatttt gatatctaat atttttctgt tttgatatta aacctttcac agttat >gi|12852344 Frame = +1 gctctcttcg ggccgtcgtt cgaacgaaag gtcgtccctg tgaccgacga ggtggtttga gcagctgtcg ccatgttgtc ggtcgccgcc cgctcgggcc cgttcgcgcc cgtcctatcg gccacttccc gcggggtggc gggcgcgctg cgtcctctgc tgcaaggcgc ggtgcccgcc gcctcggagc cacctgttct ggatgtgaag cgacccttcc tgtgccgcga gtccctgagt ggccaggccg cagcccggcc tttggtggcc acggtgggcc tgaacgttcc tgcttctgtc cgtttttccc atacagatgt caaggtgccc gacttctctg actatcgtcg tgctgaagtt cttgatagca caaaatcttc taaagaaagc agtgaggcta gaaaaggctt ctcttacctg gtaactgcaa ctactactgt gggtgttgct tatgcggcca aaaatgtggt ctcccagttt gtttccagca tgagtgcttc tgctgacgta ctggccatgt cgaagatcga gatcaagttg tctgatatcc ctgaagggaa gaacatggct tttaaatgga gaggcaaacc tctgtttgtg cgccatagaa ccaagaagga gattgaccag gaagctgcag tcgaagtgtc ccagttaagg gacccacagc atgatttaga tcgagtaaag aaacctgaat gggttattct gataggtgtc tgtactcatc ttggttgtgt acccattgca aacgcaggag attttggtgg ctattattgc ccctgccatg ggtcacacta tgacgcctct ggcaggatca ggaagggccc tgcacctctc aacctggaag tgcctgccta cgagttcacc agtgatgatg tagttgttgt gggttagaca cgtggactca gggcctaggt ttctgtcggt cttcaggtcc cctcagaaga gtggagagta agccttgtgt acgtctaggt tggttgattt aaaatattta agaattgtta ataatgtatt ggcaaacatt aatgtgaagt aattgaattc actgttaaat attatcaagc attagcataa taaaaccact gttgaacatc attagattca gtcatagact tgaaaggtgc aatgtctttg atagctaatt ctaataaaac attacagatt gttgtattgg tgttctcatc taaatttctt ttcgtatctt gaacttgaga aaaggtgggg acattatttt tcatctcaaa gtggatggga aaatcatttt gatatctaat atttttctgt tttgatatta aacctttcac agttat >gi|12848765 Frame = +3 gggtttgagc agctgtcgcc atgttgtcgg tcgccgcccg ctcgggcccg ttcgcgcccg tcctatcggc cacttcccgc ggggtggcgg gcgcgctgcg tcctctgctg caaggcgcgg tgcccgccgc ctcggagcca cctgttctgg atgtgaagcg acccttcctg tgccgcgagt ccctgagtgg ccaggccgca gcccggcctt tggtggccac ggtgggcctg aacgttcctg cttctgtccg tttttcccat acagatgtca aggtgcccga cttctctgac tatcgtcgtg ctgaagttct tgatagcaca aaatcttcta aagaaagcag tgaggctaga aaaggcttct cttacctggt aactgcaact actactgtgg gtgttgctta tgcggccaaa aatgtggtct cccagtttgt ttccagcatg agtgcttctg ctgacgtact ggccatgtcg aagatcgaga tcaagttgtc tgatatccct gaagggaaga acatggcttt taaatggaga ggcaaacctc tgtttgtgcg ccatagaacc aagaaggaga ttgaccagga agctgcagtc gaagtgtccc agttaaggga cccacagcat gatttagatc gagtaaagaa acctgaatgg gttattctga taggtgtctg tactcatctt ggttgtgtac ccattgcaaa cgcaggagat tttggtggct attattgccc ctgccatggg tcacactatg acgcctctgg caggatcagg aagggccctg cacctctcaa cctggaagtg cctgcctacg agttcaccag tgatgatgta gttgttgtgg gttagacacg tggactcagg gcctaggttt ctgtcggtct tcaggtcccc tcagaagagt ggagagtaag ccttgtgtac gtctaggttg gttgatttaa aatatttaag aattgttaat aatgtattgg caaacattaa tgtgaagtaa ttgaattcac tgttaaatat tatcaagcat tagcataata aaaccactgt tgaacacc >gi|18044190 Frame = +2 cccgctcctc ttcgggccgt cgttcgaacg aaaggtcgtc cctgtgaccg acgaggtggt ttgagcagct gtcgccatgt tgtcggtcgc cgcccgctcg ggcccgttcg cgcccgtcct atcggccact tcccgcgggg tggcgggcgc gctgcgtcct ctgctgcaag gcgcggtgcc cgccgcctcg gagccacctg ttctggatgt gaagcgaccc ttcctgtgcc gcgagtccct gagtggccag gccgcagccc ggcctttggt ggccacggtg ggcctgaacg ttcctgcttc tgtccgtttt tcccatacag atgtcaaggt gcccgacttc tctgactatc gtcgtgctga agttcttgat agcacaaaat cttctaaaga aagcagtgag gctagaaaag gcttctctta cctggtaact gcaactacta ctgtgggtgt tgcttatgcg gccaaaaatg tggtctccca gtttgtttcc agcatgagtg cttctgctga cgtactggcc atgtcgaaga tcgagatcaa gttgtctgat atccctgaag ggaagaacat ggcttttaaa tggagaggca aacctctgtt tgtgcgccat agaaccaaga aggagattga ccaggaagct gcagtcgaag tgtcccagtt aagggaccca cagcatgatt tagatcgagt aaagaaacct gaatgggtta ttctgatagg tgtctgtact catcttggtt gtgtacccat tgcaaacgca ggagattttg gtggctatta ttgcccctgc catgggtcac actatgacgc ctctggcagg atcaggaagg gccctgcacc tctcaacctg gaagtgcctg cctacgagtt caccagtgat gatgtagttg ttgtgggtta gacacgtgga ctcagggcct aggtttctgt cggtcttcag gtcccctcag aagagtggag agtaagcctt gtgtacgtct aggttggttg atttaaaata tttaagaatt gttaataatg tattggcaaa cattaatgtg aagtaattga attcactgtt aaatattatc aagcattagc ataataaaac cactgttgaa catcattaga ttcagtcata gacttgaaag gtgcaatgtc tttgatagct aattctaata aaacattaca gattgttgta aaaaaaaaaa aaaa >gi|28422109 Frame = +2 cccgctcctc ttcgggccgt cgttcgaacg aaaggtcgtc cctgtgaccg acgaggtggt ttgagcagct gtcgccatgt tgtcggtcgc cgcccgctcg ggcccgttcg cgcccgtcct atcggccact tcccgcgggg tggcgggcgc gctgcgtcct ctgctgcaag gcgcggtgcc cgccgcctcg gagccacctg ttctggatgt gaagcgaccc ttcctgtgcc gcgagtccct gagtggccag gccgcagccc ggcctttggt ggccacggtg ggcctgaacg ttcctgcttc tgtccgtttt tcccatacag atgtcaaggt gcccgacttc tctgactatc gtcgtgctga agttcttgat agcacaaaat cttctaaaga aagcagtgag gctagaaaag gcttctctta cctggtaact gcaactacta ctgtgggtgt tgcttatgcg gccaaaaatg tggtctccca gtttgtttcc agcatgagtg cttctgctga cgtactggcc atgtcgaaga tcgagatcaa gttgtctgat atccctgaag ggaagaacat ggcttttaaa tggagaggca aacctctgtt tgtgcgccat agaaccaaga aggagattga ccaggaagct gcagtcgaag tgtcccagtt aagggaccca cagcatgatt tagatcgagt aaagaaacct gaatgggtta ttctgatagg tgtctgtact catcttggtt gtgtacccat tgcaaacgca ggagattttg gtggctatta ttgcccctgc catgggtcac actatgacgc ctctggcagg atcaggaagg gccctgcacc tctcaacctg gaagtgcctg cctacgagtt caccagtgat gatgtagttg ttgtgggtta gacacgtgga ctcagggcct aggtttctgt cggtcttcag gtcccctcag aagagtggag agtaagcctt gtgtacgtct aggttggttg atttaaaata tttaagaatt gttaataatg tattggcaaa cattaatgtg aagtaattga attcactgtt aaatattatc aagcattagc ataataaaac cactgttgaa catcattaga ttcagtcata gacttgaaag gtgcaatgtc tttgatagct aattctaata aaacattaca gattgttgta aaaaaaaaaa aaaa >gi|163043 Frame = +1 ggagctgctg tcgccatgtt gtcggttgcc gcccgctcgc gccattcgcg cccgtcctat cggccacgtc ccgcggggtg gcgcgcgctg cggccctggt acagccggtc gtccaaggag tcgcctgtgc tggacttgaa gcgctccgtc ctgtgccggg agtcgctcag aggccaggcc gcggcggctt tggtcgcttc cgtgagcctc aatgtccctg cttctgtccg ttattcccat acagacatca aagtgcctga cttctctgac tatcgtcgcc ctgaagtgtt agatagtaca aagtcttcaa aagagagcag tgaggctcgg aaaggtttct cctatttggt gactgcaaca actactgtgg gtgttgcata tgctgccaag aatgtcgtct ctcagtttgt ttccagcatg agtgcttctg ccgatgtgtt ggccatgtcg aaaattgaaa tcaagttatc cgatattcca gaggggaaga acatggcttt caaatggaga ggcaaacccc tgttcgtgcg ccatcgaacc aagaaggaaa ttgaccagga agctgcagtt gaagtgtccc agttgaggga cccacagcat gacttagaac gagtaaagaa acctgagtgg gttatcttga taggtgtttg cactcatctt ggttgtgtac ccattgcaaa tgcaggagat tttggtggtt attactgccc ttgccatggg tcacactatg atgcgtctgg cagaatcaga aaggggcctg cacctctcaa ccttgaagtt ccctcatatg agttcaccag cgatgatatg gtgattgttg gttagagaga cctggactcg agttacaggc ttctttcgtc ttcatgtcac ctcagaagag ttacttgaag aacaagcctt ctgtgctttg aattagttga tttgaaatat ttaagaattg ctaataatgt gtttgcaaac atgtaaattg aatttaatgt tgaatacttt caagcattca cctaaaaaag ccccccatta aacattgtta tgctcaaagg gtgcagtgtc tttgatagtt aattctaatt aaaaattgta gatgagtgta taaaatattt gtgaaatctg ta >gi|5174742 frame = +1 gtcgtcacgc gtcccgcgcc tcctcgcgcc tgcaccgtgg ttggaaggtc gtcccctgtg accggttggg cggttggagc ggctgtcgcc atgttgtcgg tagcagcccg ctcgggcccg ttcgcgcccg tcctgtcggc cacgtcccgc ggggtggcgg gcgcgctgcg gcccttggtg caggccacgg tgcccgccac cccggagcag cctgtgttgg acctgaagcg gcccttcctc agccgggagt cgctgagcgg ccaggccgtg cgccggcctt tggtcgcctc cgtgggcctc aatgtccctg cttctgtttg ttattcccac acagacatca aggtgcctga cttctctgaa taccgccgcc ttgaagtttt agatagtacg aagtcttcaa gagaaagcag cgaggctagg aaaggtttct cctatttggt aactggagta actactgtgg gtgtcgcata tgctgccaag aatgccgtca cccagttcgt ttccagcatg agtgcttctg ctgatgtgtt ggccctggcg aaaatcgaaa tcaagttatc cgatattcca gaaggcaaga acatggcttt caaatggaga ggcaaacccc tgtttgtgcg tcatagaacc cagaaggaaa ttgagcagga agctgcagtt gaattatcac agttgaggga cccacagcat gatctagatc gagtaaagaa acctgaatgg gttatcctga taggtgtttg cactcatctt ggctgtgtac ccattgcaaa tgcaggagat tttggtggtt attactgccc ttgccatggg tcacactatg atgcatctgg caggatcaga ttgggtcctg ctcctctcaa ccttgaagtc cccacgtatg agttcaccag tgacgatatg gtgattgttg gttaagagac ttggactcaa gtcataggct tctttcagtc tttatgtcac ctcaggagac ttatttgaga ggaagccttc tgtacttgaa gttgatttga aatatgtaag aattgatgat gtatttgcaa acattaatgt gaaataaatt gaatttaatg ttgaatactt tcaggcattc acttaataaa gacactgtta agcactgtta tgctcagtca tacacgcgaa aggtacaatg tcttttagct aattctaatt aaaaattaca gactggtgta caagatactt gtg ----------------------------------------------------------------------------- *alignment - see SU5-align_clustalw.html ----------------------------------------------------------------------------- *Frame 6 >gi|12834944 >gi|13385167 Frame 0 ALFGPSFERKVVPVTDEVVAAVAMLSVAARSGPFAPVLSATSRGVAGALRPLLQGAVPA ASEPPVLDVKRPFLCRESLSGQAAARPLVATVGLNVPASVRFSHTDVKVPDFSDYRRAEV LDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKL SDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGV CTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVGT RGLRAVSVGLQVPSEEWRVSLVYVVGFKIFKNCCIGKHCEVIEFTVKYYQALA NHCTSLDSVIDLKGAMSLIANSNKTLQIVVLVFSSKFLFVSTEKVGTLFFISKWMG KSFYLIFFCFDIKPFTV >gi|12852344 Frame 0 ALFGPSFERKVVPVTDEVVAAVAMLSVAARSGPFAPVLSATSRGVAGALRPLLQGAVPA ASEPPVLDVKRPFLCRESLSGQAAARPLVATVGLNVPASVRFSHTDVKVPDFSDYRRAEV LDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKL SDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGV CTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVGT RGLRAVSVGLQVPSEEWRVSLVYVVGFKIFKNCCIGKHCEVIEFTVKYYQALA NHCTSLDSVIDLKGAMSLIANSNKTLQIVVLVFSSKFLFVSTEKVGTLFFISKWMG KSFYLIFFCFDIKPFTV >gi|12848765 Frame 2 VAAVAMLSVAARSGPFAPVLSATSRGVAGALRPLLQGAVPAASEPPVLDVKRPFLCRES LSGQAAARPLVATVGLNVPASVRFSHTDVKVPDFSDYRRAEVLDSTKSSKESSEARKGFS YLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPL FVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGY YCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVGTRGLRAVSVGLQVPSEEW RVSLVYVVGFKIFKNCCIGKHCEVIEFTVKYYQALANHCT >gi|18044190 Frame 1 PLLFGPSFERKVVPVTDEVVAAVAMLSVAARSGPFAPVLSATSRGVAGALRPLLQGAVP AASEPPVLDVKRPFLCRESLSGQAAARPLVATVGLNVPASVRFSHTDVKVPDFSDYRRAE VLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIK LSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIG VCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG TRGLRAVSVGLQVPSEEWRVSLVYVVGFKIFKNCCIGKHCEVIEFTVKYYQALA NHCTSLDSVIDLKGAMSLIANSNKTLQIVVKKKK >gi|2842219 Frame 1 PLLFGPSFERKVVPVTDEVVAAVAMLSVAARSGPFAPVLSATSRGVAGALRPLLQGAVP AASEPPVLDVKRPFLCRESLSGQAAARPLVATVGLNVPASVRFSHTDVKVPDFSDYRRAE VLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIK LSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIG VCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG TRGLRAVSVGLQVPSEEWRVSLVYVVGFKIFKNCCIGKHCEVIEFTVKYYQALA NHCTSLDSVIDLKGAMSLIANSNKTLQIVVKKKK >gi|16343 Frame 0 GAAVAMLSVAARSRHSRPSYRPRPAGWRALRPWYSRSSKESPVLDLKRSVLCRESLRGQA AAALVASVSLNVPASVRYSHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTAT TTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRT KKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHG SHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVGRDLDSSYRLLSSSCHLRRVTRTSL LCFELVDLKYLRIANNVFANMIEFNVEYFQAFTKSPPLNIVMLKGCSVFDSFLKIV DECIKYLNL >gi|5174742 frame = +1 Frame 0 VVTRPAPPRACTVVGRSSPVTGWAVGAAVAMLSVAARSGPFAPVLSATSRGVAGALRPLV QATVPATPEQPVLDLKRPFLSRESLSGQAVRRPLVASVGLNVPASVCYSHTDIKVPDFSE YRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALA KIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEW VILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDM VIVGETWTQVIGFFQSLCHLRRLIEEAFCTSFEICKNCICKHCEINICIL SGIHLIKTLLSTVMLSHTRERYNVFLILIKNYRLVYKILV ----------------------------------------------------- AA alignment - see html file